On Consistency and Sparsity for Principal Components Analysis in High Dimensions
Iain M. Johnstone, Arthur Yu Lu
Journal of the American Statistical Association · 2009 · Volume 104 · Issue 486
Abstract
Principal components analysis (PCA) is a classic method for the reduction of dimensionality of data in the form of n observations (or cases) of a vector with p variables. Contemporary datasets often have p comparable with or even much larger than n . Our main assertions, in such settings, are (a) that some initial reduction in dimensionality is desirable before applying any PCA-type search for principal modes, and (b) the initial reduction in dimensionality is best achieved by working in a basis in which the signals have a sparse representation. We describe a simple asymptotic model in which the estimate of the leading principal component vector via standard PCA is consistent if and only if p ( n )/ n → 0. We provide a simple algorithm for selecting a subset of coordinates with largest sample variances, and show that if PCA is done on the selected subset, then consistency is recovered, even if p ( n ) ≫ n .
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